MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,335
rRNA: 8
tRNA: 72
tmRNA: 1
Total number of protein coding genes annotated/found:
4,123
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5013|JADGKQ010000002.1
MBF0728182.1
Genome Viewer
NA
AA
150/50
1-150
IS4 family transposase
SEQF5013|JADGKQ010000005.1
MBF0728672.1
Genome Viewer
NA
AA
150/50
1-150
IS4 family transposase
SEQF5013|JADGKQ010000006.1
MBF0728802.1
Genome Viewer
NA
AA
657/219
1-658
transposase
SEQF5013|JADGKQ010000011.1
MBF0729225.1
Genome Viewer
NA
AA
147/49
1-149
hypothetical protein
SEQF5013|JADGKQ010000033.1
MBF0730647.1
Genome Viewer
NA
AA
735/245
1-737
PD-(D/E)XK nuclease family transposase
SEQF5013|JADGKQ010000038.1
MBF0730819.1
Genome Viewer
NA
AA
354/118
1-356
efflux RND transporter permease subunit
SEQF5013|JADGKQ010000047.1
MBF0731105.1
Genome Viewer
NA
AA
204/68
1-204
transposase
SEQF5013|JADGKQ010000050.1
MBF0731183.1
Genome Viewer
NA
AA
204/68
1-204
transposase
SEQF5013|JADGKQ010000058.1
MBF0731373.1
Genome Viewer
NA
AA
927/309
1-928
AHH domain-containing protein
SEQF5013|JADGKQ010000086.1
MBF0731809.1
Genome Viewer
NA
AA
318/106
1-320
efflux RND transporter permease subunit
SEQF5013|JADGKQ010000090.1
MBF0731853.1
Genome Viewer
NA
AA
285/95
1-287
hypothetical protein
SEQF5013|JADGKQ010000092.1
MBF0731875.1
Genome Viewer
NA
AA
201/67
1-201
hypothetical protein
SEQF5013|JADGKQ010000101.1
MBF0731951.1
Genome Viewer
NA
AA
396/132
1-398
hypothetical protein
SEQF5013|JADGKQ010000111.1
MBF0732003.1
Genome Viewer
NA
AA
204/68
1-204
hypothetical protein
SEQF5013|JADGKQ010000114.1
MBF0732015.1
Genome Viewer
NA
AA
396/132
1-398
hypothetical protein
SEQF5013|JADGKQ010000120.1
MBF0732033.1
Genome Viewer
NA
AA
561/187
1-561
signal peptidase I
SEQF5013|JADGKQ010000126.1
MBF0732044.1
Genome Viewer
NA
AA
663/221
1-665
PD-(D/E)XK nuclease family transposase
SEQF5013|JADGKQ010000128.1
MBF0732047.1
Genome Viewer
NA
AA
432/144
1-433
transposase
SEQF5013|JADGKQ010000140.1
MBF0732059.1
Genome Viewer
NA
AA
1212/404
1-1214
site-specific integrase
SEQF5013|JADGKQ010000145.1
MBF0732065.1
Genome Viewer
NA
AA
1070/356
1-1071
IS4 family transposase
Items 1 - 20
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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